Detailed information of evm.model.Chr16.487 in Hemicorallium imperiale

Genomic Location: Chr16:10093567...10277601
NR annotation: XP_028405893.1, BRCA1-associated protein-like [Dendronephthya gigantea]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr16.487 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q7Z569BRCA1-associated protein OS=Homo sapiens OX=9606 GN=BRAP PE=1 SV=2
Q99MP8BRCA1-associated protein OS=Mus musculus OX=10090 GN=Brap PE=1 SV=1
Q95QN6BRCA1-associated protein homolog 2 OS=Caenorhabditis elegans OX=6239 GN=brap-2 PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003415 (this species only)
Ubiquitin familyE3|E3 activity RING|RING · all ubiquitin genes in this species
Ubiquitin familyUBD|ZnF|ZnF_UBP · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02148
all species →
zf-UBPZn-finger in ubiquitin-hydrolases and other proteinDomainInterproscan
PF13639
all species →
zf-RING_2Ring finger domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001607
all species →
DomainZinc finger, UBP-typeInterproscan
IPR047243
all species →
DomainBRCA1-associated protein, RING finger, H2 subclassInterproscan
IPR001841
all species →
DomainZinc finger, RING-typeInterproscan
IPR013083
all species →
Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24007
all species →
BRCA1-ASSOCIATED PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0008270
all species →
Molecular Functionzinc ion bindingInterproscan
GO:0005737
all species →
Cellular ComponentcytoplasmInterproscan
GO:0007265
all species →
Biological ProcessRas protein signal transductionInterproscan
GO:0016567
all species →
Biological Processprotein ubiquitinationInterproscan
GO:0061630
all species →
Molecular Functionubiquitin protein ligase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr16.487.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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