Detailed information of evm.model.Chr16.490 in Hemicorallium imperiale

Genomic Location: Chr16:10093523...10440465
NR annotation: XP_028405893.1, BRCA1-associated protein-like [Dendronephthya gigantea]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr16.490 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q7Z569BRCA1-associated protein OS=Homo sapiens OX=9606 GN=BRAP PE=1 SV=2
Q99MP8BRCA1-associated protein OS=Mus musculus OX=10090 GN=Brap PE=1 SV=1
Q95QN6BRCA1-associated protein homolog 2 OS=Caenorhabditis elegans OX=6239 GN=brap-2 PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003415 (this species only)
Ubiquitin familyE3|E3 activity RING|RING · all ubiquitin genes in this species
Ubiquitin familyUBD|ZnF|ZnF_UBP · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02148
all species →		zf-UBPZn-finger in ubiquitin-hydrolases and other proteinDomainInterproscan
PF07576
all species →		BRAP2BRCA1-associated protein 2FamilyInterproscan
PF13639
all species →		zf-RING_2Ring finger domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013083
all species →		Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR001607
all species →		DomainZinc finger, UBP-typeInterproscan
IPR047243
all species →		DomainBRCA1-associated protein, RING finger, H2 subclassInterproscan
IPR034932
all species →		DomainBRAP2, RNA recognition motifInterproscan
IPR001841
all species →		DomainZinc finger, RING-typeInterproscan
IPR011422
all species →		DomainBRCA1-associated 2/ETP1, RRMInterproscan
IPR035979
all species →		Homologous_superfamilyRNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24007
all species →		BRCA1-ASSOCIATED PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0008270
all species →		Molecular Functionzinc ion bindingInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0007265
all species →		Biological ProcessRas protein signal transductionInterproscan
GO:0016567
all species →		Biological Processprotein ubiquitinationInterproscan
GO:0061630
all species →		Molecular Functionubiquitin protein ligase activityInterproscan
GO:0003676
all species →		Molecular Functionnucleic acid bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K10632BRAP; BRCA1-associated proteinEC:2.3.2.27
Ubiquitin systemko04121deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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