Detailed information of evm.model.Chr17.280 in Hemicorallium imperiale

Genomic Location: Chr17:6563149...6564005
NR annotation: CAB3983202.1, calpain-B-like isoform X9 [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O88456Calpain small subunit 1 OS=Mus musculus OX=10090 GN=Capns1 PE=1 SV=2
Q64537Calpain small subunit 1 OS=Rattus norvegicus OX=10116 GN=Capns1 PE=1 SV=3
P06815Calpain-1 catalytic subunit (Fragment) OS=Oryctolagus cuniculus OX=9986 GN=CAPN1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
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 InterPro
InterPro termTypeDescriptionSource
IPR011992Homologous_superfamilyEF-hand domain pairInterproscan
IPR018247Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR002048DomainEF-hand domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46735CALPAIN, SMALL SUBUNIT 1 A-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan

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