Detailed information of evm.model.Chr17.357 in Hemicorallium imperiale

Genomic Location: Chr17:8669983...8671463
NR annotation: CAB3980471.1, ubiquitin 4A [Paramuricea clavata]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr17.357 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
B7NZQ9Ubiquitin-like protein 4A OS=Oryctolagus cuniculus OX=9986 GN=UBL4A PE=3 SV=1
Q0D261Ubiquitin-like protein 4A OS=Xenopus laevis OX=8355 GN=ubl4a PE=2 SV=1
C3KHF2Ubiquitin-like protein 4A OS=Anoplopoma fimbria OX=229290 GN=ubl4a PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000491 (this species only) · gene tree & orthology
Ubiquitin familyULD|UBL|NEDD8 · all ubiquitin genes in this species
Ubiquitin familyULD|UFD/UBQ|UBQ_Other · all ubiquitin genes in this species
Ubiquitin familyULD|UFD/UBQ|UBQ_PIM · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00240
all species →		ubiquitinUbiquitin familyDomainInterproscan
PF17840
all species →		TugsTethering Ubl4a to BAGS domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000626
all species →		DomainUbiquitin-like domainInterproscan
IPR029071
all species →		Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan
IPR019956
all species →		DomainUbiquitin domainInterproscan
IPR041421
all species →		DomainUbl4, C-terminal TUGS domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46555
all species →		UBIQUITIN-LIKE PROTEIN 4AInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0006620
all species →		Biological Processpost-translational protein targeting to endoplasmic reticulum membraneInterproscan
GO:0051087
all species →		Molecular Functionprotein-folding chaperone bindingInterproscan
GO:0071816
all species →		Biological Processtail-anchored membrane protein insertion into ER membraneInterproscan
GO:0071818
all species →		Cellular ComponentBAT3 complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K23388UBL4; ubiquitin-like protein 4-DNA repair and recombination proteinsko03400deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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