Detailed information of evm.model.Chr17.367 in Hemicorallium imperiale

Genomic Location: Chr17:8800538...8803854
NR annotation: CAB3980992.1, F-box only 6-like [Paramuricea clavata]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr17.367 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q96EF6F-box only protein 17 OS=Homo sapiens OX=9606 GN=FBXO17 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0012480 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12937
all species →
F-box-likeF-box-likeDomainInterproscan
PF04300
all species →
FBAF-box associated regionFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR008979
all species →
Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR007397
all species →
DomainF-box associated (FBA) domainInterproscan
IPR036047
all species →
Homologous_superfamilyF-box-like domain superfamilyInterproscan
IPR001810
all species →
DomainF-box domainInterproscan
IPR039752
all species →
FamilyF-box only proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12125
all species →
F-BOX ONLY PROTEIN 6-LIKE PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0005737
all species →
Cellular ComponentcytoplasmInterproscan
GO:0006516
all species →
Biological Processglycoprotein catabolic processInterproscan
GO:0019005
all species →
Cellular ComponentSCF ubiquitin ligase complexInterproscan
GO:0030433
all species →
Biological Processobsolete ubiquitin-dependent ERAD pathwayInterproscan
GO:0031146
all species →
Biological ProcessSCF-dependent proteasomal ubiquitin-dependent protein catabolic processInterproscan
GO:0061630
all species →
Molecular Functionubiquitin protein ligase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr17.367.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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