Detailed information of evm.model.Chr17.417 in Hemicorallium imperiale

Genomic Location: Chr17:9506207...9517391
NR annotation: CAB3987977.1, Target of rapamycin complex 2 subunit MAPKAP1 [Paramuricea clavata]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr17.417 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9W6S3Target of rapamycin complex 2 subunit MAPKAP1 OS=Gallus gallus OX=9031 GN=MAPKAP1 PE=2 SV=1
A2VDU2Target of rapamycin complex 2 subunit MAPKAP1 OS=Bos taurus OX=9913 GN=MAPKAP1 PE=2 SV=1
A4IIM3Target of rapamycin complex 2 subunit MAPKAP1 OS=Xenopus tropicalis OX=8364 GN=mapkap1 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004519 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16979
all species →		SIN1_PHSAPK-interacting protein 1 (Sin1), Pleckstrin-homologyDomainInterproscan
PF16978
all species →		CRIMSAPK-interacting protein 1 (Sin1), middle CRIM domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR031313
all species →		DomainSAPK-interacting protein 1, Pleckstrin-homology domainInterproscan
IPR031567
all species →		DomainSin1, middle CRIM domainInterproscan
IPR008828
all species →		FamilyTORC2 component Sin1/Avo1Interproscan
IPR011993
all species →		Homologous_superfamilyPH-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13335
all species →		TARGET OF RAPAMYCIN COMPLEX 2 SUBUNIT MAPKAP1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005546
all species →		Molecular Functionphosphatidylinositol-4,5-bisphosphate bindingInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0005886
all species →		Cellular Componentplasma membraneInterproscan
GO:0031932
all species →		Cellular ComponentTORC2 complexInterproscan
GO:0038203
all species →		Biological ProcessTORC2 signalingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr17.417.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP