Detailed information of evm.model.Chr17.504 in Hemicorallium imperiale

Genomic Location: Chr17:10696197...10698252
NR annotation: CAB4004612.1, 39S ribosomal L46, mitochondrial [Paramuricea clavata]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr17.504 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9EQI8Large ribosomal subunit protein mL46 OS=Mus musculus OX=10090 GN=Mrpl46 PE=1 SV=1
Q5RK00Large ribosomal subunit protein mL46 OS=Rattus norvegicus OX=10116 GN=Mrpl46 PE=2 SV=1
Q3SZ22Large ribosomal subunit protein mL46 OS=Bos taurus OX=9913 GN=MRPL46 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003482 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00293
all species →		NUDIXNUDIX domainDomainInterproscan
PF11788
all species →		MRP-L4639S mitochondrial ribosomal protein L46 FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000086
all species →		DomainNUDIX hydrolase domainInterproscan
IPR040008
all species →		FamilyLarge ribosomal subunit protein mL46Interproscan
IPR015797
all species →		Homologous_superfamilyNUDIX hydrolase-like domain superfamilyInterproscan
IPR021757
all species →		DomainLarge ribosomal subunit protein mL46, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13124
all species →		39S RIBOSOMAL PROTEIN L46, MITOCHONDRIAL PRECURSOR-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003735
all species →		Molecular Functionstructural constituent of ribosomeInterproscan
GO:0005762
all species →		Cellular Componentmitochondrial large ribosomal subunitInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K17427MRPL46; large subunit ribosomal protein L46-Ribosomeko03011deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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