Detailed information of evm.model.Chr17.540 in Hemicorallium imperiale

Genomic Location: Chr17:10998109...11003279
NR annotation: CAB4006388.1, rabenosyn-5-like [Paramuricea clavata]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr17.540 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9H1K0Rabenosyn-5 OS=Homo sapiens OX=9606 GN=RBSN PE=1 SV=2
Q80Y56Rabenosyn-5 OS=Mus musculus OX=10090 GN=Rbsn PE=1 SV=1
P32609Vacuolar segregation protein PEP7 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=PEP7 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006405 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01363
all species →		FYVEFYVE zinc fingerDomainInterproscan
PF04826
all species →		Arm_2Armadillo-likeRepeatInterproscan
PF11464
all species →		RbsnRabenosyn Rab binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR052727
all species →		FamilyRab4/Rab5 effector domain-containing proteinInterproscan
IPR000306
all species →		DomainFYVE zinc fingerInterproscan
IPR016024
all species →		Homologous_superfamilyArmadillo-type foldInterproscan
IPR036531
all species →		Homologous_superfamilyRabenosyn, Rab binding domain superfamilyInterproscan
IPR017455
all species →		DomainZinc finger, FYVE-relatedInterproscan
IPR006911
all species →		DomainArmadillo repeat-containing domainInterproscan
IPR011989
all species →		Homologous_superfamilyArmadillo-like helicalInterproscan
IPR013087
all species →		DomainZinc finger C2H2-typeInterproscan
IPR011011
all species →		Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR013083
all species →		Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR021565
all species →		DomainRabenosyn, Rab binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13510
all species →		FYVE-FINGER-CONTAINING RAB5 EFFECTOR PROTEIN RABENOSYN-5-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0046872
all species →		Molecular Functionmetal ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr17.540.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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