Detailed information of evm.model.Chr17.541 in Hemicorallium imperiale

Genomic Location: Chr17:11003558...11004562
NR annotation: XP_001624857.1, 28S ribosomal protein S25, mitochondrial [Nematostella vectensis]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr17.541 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0009594 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05047
all species →		L51_S25_CI-B8Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR007741
all species →		DomainRibosomal protein/NADH dehydrogenase domainInterproscan
IPR036249
all species →		Homologous_superfamilyThioredoxin-like superfamilyInterproscan
IPR040049
all species →		FamilyRibosomal subunit protein mS25/mL61, mitochondrialInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13274
all species →		MITOCHONDRIAL RIBOSOMAL PROTEIN S25Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003735
all species →		Molecular Functionstructural constituent of ribosomeInterproscan
GO:0005739
all species →		Cellular ComponentmitochondrionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K03020RPAC2, RPC19, POLR1D; DNA-directed RNA polymerases I and III subunit RPAC2-Transcription machineryko03021deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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