Detailed information of evm.model.Chr17.542 in Hemicorallium imperiale

Genomic Location: Chr17:11004671...11005654
NR annotation: CAB4006389.1, probable 28S ribosomal S25, mitochondrial [Paramuricea clavata]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr17.542 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P82663Small ribosomal subunit protein mS25 OS=Homo sapiens OX=9606 GN=MRPS25 PE=1 SV=1
Q4QR80Small ribosomal subunit protein mS25 OS=Rattus norvegicus OX=10116 GN=Mrps25 PE=2 SV=1
Q9D125Small ribosomal subunit protein mS25 OS=Mus musculus OX=10090 GN=Mrps25 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008219 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05047
all species →
L51_S25_CI-B8Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR040049
all species →
FamilyRibosomal subunit protein mS25/mL61, mitochondrialInterproscan
IPR007741
all species →
DomainRibosomal protein/NADH dehydrogenase domainInterproscan
IPR036249
all species →
Homologous_superfamilyThioredoxin-like superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13274
all species →
MITOCHONDRIAL RIBOSOMAL PROTEIN S25Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003735
all species →
Molecular Functionstructural constituent of ribosomeInterproscan
GO:0005739
all species →
Cellular ComponentmitochondrionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K17404MRPS25; small subunit ribosomal protein S25-Ribosomeko03011deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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