Detailed information of evm.model.Chr17.583 in Hemicorallium imperiale

Genomic Location: Chr17:11490560...11495112
NR annotation: no NCBI-NR hit recorded
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr17.583 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02178
all species →		AT_hookAT hook motifMotifInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR017956
all species →		Conserved_siteAT hook, DNA-binding motifInterproscan
IPR000116
all species →		FamilyHigh mobility group protein HMGAInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23341
all species →		HIGH MOBILITY GROUP PROTEINS HMG-A AND CInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0003712
all species →		Molecular Functiontranscription coregulator activityInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0006355
all species →		Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0000785
all species →		Cellular ComponentchromatinInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K09283HMGA2; high mobility group AT-hook protein 2-Chromosome and associated proteinsko03036deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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