Detailed information of evm.model.Chr17.783 in Hemicorallium imperiale

Genomic Location: Chr17:15520674...15547023
NR annotation: XP_028407896.1, contactin-3-like [Dendronephthya gigantea]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr17.783 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q62682Contactin-3 OS=Rattus norvegicus OX=10116 GN=Cntn3 PE=1 SV=1
Q9P232Contactin-3 OS=Homo sapiens OX=9606 GN=CNTN3 PE=1 SV=3
Q07409Contactin-3 OS=Mus musculus OX=10090 GN=Cntn3 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000412 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13927
all species →		Ig_3Immunoglobulin domainDomainInterproscan
PF00041
all species →		fn3Fibronectin type III domainDomainInterproscan
PF13895
all species →		Ig_2Immunoglobulin domainDomainInterproscan
PF13882
all species →		Bravo_FIGEYBravo-like intracellular regionDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036179
all species →		Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR003961
all species →		DomainFibronectin type IIIInterproscan
IPR013783
all species →		Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR036116
all species →		Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR007110
all species →		DomainImmunoglobulin-like domainInterproscan
IPR003599
all species →		DomainImmunoglobulin subtypeInterproscan
IPR026966
all species →		DomainNeurofascin/L1/NrCAM, C-terminal domainInterproscan
IPR003598
all species →		DomainImmunoglobulin subtype 2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR44170
all species →		PROTEIN SIDEKICKInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0005886
all species →		Cellular Componentplasma membraneInterproscan
GO:0007411
all species →		Biological Processaxon guidanceInterproscan
GO:0030424
all species →		Cellular ComponentaxonInterproscan
GO:0098609
all species →		Biological Processcell-cell adhesionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K06756NRCAM; neuronal cell adhesion molecule-Cell adhesion moleculesko04514deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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