Detailed information of evm.model.Chr17.789 in Hemicorallium imperiale

Genomic Location: Chr17:15953708...16012036
NR annotation: XP_028408042.1, contactin-6-like [Dendronephthya gigantea]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q3MHH1Protein SHQ1 homolog OS=Bos taurus OX=9913 GN=SHQ1 PE=2 SV=1
Q6PI26Protein SHQ1 homolog OS=Homo sapiens OX=9606 GN=SHQ1 PE=1 SV=2
Q05B18Protein SHQ1 homolog OS=Xenopus tropicalis OX=8364 GN=shq1 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00041fn3Fibronectin type III domainDomainInterproscan
PF21413SHQ1-like_CSSHQ1-like, CS domainDomainInterproscan
PF04925SHQ1SHQ1 protein, Shq1 domainDomainInterproscan
PF13927Ig_3Immunoglobulin domainDomainInterproscan
PF07679I-setImmunoglobulin I-set domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR039742FamilyProtein Shq1Interproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR007052DomainCS domainInterproscan
IPR003961DomainFibronectin type IIIInterproscan
IPR008978Homologous_superfamilyHSP20-like chaperoneInterproscan
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR036116Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR048696DomainSHQ1-like, CS domainInterproscan
IPR007009DomainShq1, C-terminal domainInterproscan
IPR003599DomainImmunoglobulin subtypeInterproscan
IPR003598DomainImmunoglobulin subtype 2Interproscan
IPR013098DomainImmunoglobulin I-setInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12967UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000493Biological Processbox H/ACA snoRNP assemblyInterproscan
GO:0005654Cellular ComponentnucleoplasmInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0051082Molecular Functionunfolded protein bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

TOP