Detailed information of evm.model.Chr18.316 in Hemicorallium imperiale

Genomic Location: Chr18:7790961...7828361
NR annotation: XP_028415525.1, bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 4-like [Dendronephthya gigantea]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O95803Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 3 OS=Homo sapiens OX=9606 GN=NDST3 PE=1 SV=1
Q9H3R1Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 4 OS=Homo sapiens OX=9606 GN=NDST4 PE=1 SV=1
Q9EQH7Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 3 OS=Mus musculus OX=10090 GN=Ndst3 PE=2 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002036 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12062
all species →		HSNSDheparan sulfate-N-deacetylaseFamilyInterproscan
PF00685
all species →		Sulfotransfer_1Sulfotransferase domainDomainInterproscan
PF00736
all species →		EF1_GNEEF-1 guanine nucleotide exchange domainDomainInterproscan
PF10587
all species →		EF-1_beta_acidEukaryotic elongation factor 1 beta central acidic regionDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR037359
all species →		FamilyHeparan sulfate sulfotransferaseInterproscan
IPR014038
all species →		DomainTranslation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange domainInterproscan
IPR021930
all species →		DomainHeparan sulphate-N-deacetylaseInterproscan
IPR000863
all species →		DomainSulfotransferase domainInterproscan
IPR014717
all species →		Homologous_superfamilyTranslation elongation factor EF1B/small ribosomal subunit protein bS6Interproscan
IPR018940
all species →		DomainElongation factor 1 beta central acidic region, eukaryoteInterproscan
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR036219
all species →		Homologous_superfamilyTranslation elongation factor eEF-1beta-like superfamilyInterproscan
IPR001326
all species →		Conserved_siteTranslation elongation factor EF1B, beta/delta chains, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10605
all species →		HEPARAN SULFATE SULFOTRANSFERASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005794
all species →		Cellular ComponentGolgi apparatusInterproscan
GO:0008146
all species →		Molecular Functionsulfotransferase activityInterproscan
GO:0015014
all species →		Biological Processheparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic processInterproscan
GO:0015016
all species →		Molecular Function[heparan sulfate]-glucosamine N-sulfotransferase activityInterproscan
GO:0019213
all species →		Molecular Functiondeacetylase activityInterproscan
GO:0003746
all species →		Molecular Functiontranslation elongation factor activityInterproscan
GO:0006414
all species →		Biological Processtranslational elongationInterproscan
GO:0016787
all species →		Molecular Functionhydrolase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr18.316.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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