Detailed information of evm.model.Chr18.462 in Hemicorallium imperiale

Genomic Location: Chr18:12097542...12126757
NR annotation: XP_028411846.1, uncharacterized protein LOC114534583 [Dendronephthya gigantea]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8WPD0Alpha-N-acetylgalactosamine-specific lectin OS=Patiria pectinifera OX=7594 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000086 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07645
all species →		EGF_CACalcium-binding EGF domainDomainInterproscan
PF00059
all species →		Lectin_CLectin C-type domainDomainInterproscan
PF07648
all species →		Kazal_2Kazal-type serine protease inhibitor domainDomainInterproscan
PF00084
all species →		SushiSushi repeat (SCR repeat)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002350
all species →		DomainKazal domainInterproscan
IPR035976
all species →		Homologous_superfamilySushi/SCR/CCP superfamilyInterproscan
IPR001881
all species →		DomainEGF-like calcium-binding domainInterproscan
IPR000436
all species →		DomainSushi/SCR/CCP domainInterproscan
IPR001304
all species →		DomainC-type lectin-likeInterproscan
IPR000152
all species →		PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR049883
all species →		DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR016187
all species →		Homologous_superfamilyC-type lectin foldInterproscan
IPR050801
all species →		FamilyCalcium-Dependent Lectins in Immunity and DevelopmentInterproscan
IPR000742
all species →		DomainEGF-like domainInterproscan
IPR016186
all species →		Homologous_superfamilyC-type lectin-like/link domain superfamilyInterproscan
IPR018097
all species →		Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR036058
all species →		Homologous_superfamilyKazal domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22801
all species →		LITHOSTATHINEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0005509
all species →		Molecular Functioncalcium ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr18.462.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP