Gene detail

Detailed information of evm.model.Chr18.647 in Hemicorallium imperiale

Genomic Location: Chr18:16124809...16138019
NR annotation: XP_028405157.1, elongator complex protein 6-like isoform X1 [Dendronephthya gigantea]
Species abbreviation HIMPE · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q0PNE2	Elongator complex protein 6 OS=Homo sapiens OX=9606 GN=ELP6 PE=1 SV=1
Q0IHA2	Elongator complex protein 6 OS=Xenopus laevis OX=8355 GN=elp6 PE=2 SV=1
Q28CX0	Elongator complex protein 6 OS=Xenopus tropicalis OX=8364 GN=elp6 PE=2 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005698 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF09807 all species →	ELP6	Elongation complex protein 6	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR018627 all species →	Family	Elongator complex protein 6	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16184 all species →	ELONGATOR COMPLEX PROTEIN 6	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0002098 all species →	Biological Process	tRNA wobble uridine modification	Interproscan
GO:0033588 all species →	Cellular Component	elongator holoenzyme complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K11377	ELP6; elongator complex protein 6	-	Transfer RNA biogenesis	ko03016	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.