Detailed information of evm.model.Chr18.765 in Hemicorallium imperiale

Genomic Location: Chr18:19052796...19075779
NR annotation: CAG8673336.1, 19484_t:CDS:2 [Gigaspora margarita]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000543 (this species only) · gene tree & orthology
Ubiquitin familyDUB|USP|USP · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00443
all species →		UCHUbiquitin carboxyl-terminal hydrolaseFamilyInterproscan
PF13855
all species →		LRR_8Leucine rich repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003653
all species →		DomainUlp1 protease family, C-terminal catalytic domainInterproscan
IPR028889
all species →		DomainUbiquitin specific protease domainInterproscan
IPR038765
all species →		Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR036691
all species →		Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR001394
all species →		DomainPeptidase C19, ubiquitin carboxyl-terminal hydrolaseInterproscan
IPR001611
all species →		RepeatLeucine-rich repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR35385
all species →		PROTEIN B, PUTATIVE-RELATED-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006508
all species →		Biological ProcessproteolysisInterproscan
GO:0008234
all species →		Molecular Functioncysteine-type peptidase activityInterproscan
GO:0004843
all species →		Molecular Functioncysteine-type deubiquitinase activityInterproscan
GO:0016579
all species →		Biological Processprotein deubiquitinationInterproscan
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr18.765.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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