Gene detail

Detailed information of evm.model.Chr19.108 in Hemicorallium imperiale

Genomic Location: Chr19:2069234...2108066
NR annotation: CAB3987286.1, eyes shut homolog [Paramuricea clavata]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q8K4L0	ATP-dependent RNA helicase DDX54 OS=Mus musculus OX=10090 GN=Ddx54 PE=1 SV=1
Q8TDD1	ATP-dependent RNA helicase DDX54 OS=Homo sapiens OX=9606 GN=DDX54 PE=1 SV=2
A2YV85	DEAD-box ATP-dependent RNA helicase 29 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_028228 PE=2 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08147	DBP10CT	DBP10CT (NUC160) domain	Domain	Interproscan
PF02210	Laminin_G_2	Laminin G domain	Domain	Interproscan
PF00054	Laminin_G_1	Laminin G domain	Domain	Interproscan
PF00271	Helicase_C	Helicase conserved C-terminal domain	Domain	Interproscan
PF00008	EGF	EGF-like domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000742	Domain	EGF-like domain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR012541	Domain	DBP10, C-terminal	Interproscan
IPR013320	Homologous_superfamily	Concanavalin A-like lectin/glucanase domain superfamily	Interproscan
IPR001791	Domain	Laminin G domain	Interproscan
IPR014001	Domain	Helicase superfamily 1/2, ATP-binding domain	Interproscan
IPR001881	Domain	EGF-like calcium-binding domain	Interproscan
IPR001650	Domain	Helicase, C-terminal domain-like	Interproscan
IPR018097	Conserved_site	EGF-like calcium-binding, conserved site	Interproscan
IPR000152	PTM	EGF-type aspartate/asparagine hydroxylation site	Interproscan
IPR051022	Family	Notch Signaling and Cell Fate Determination	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24049	CRUMBS FAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0003724	Molecular Function	RNA helicase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005509	Molecular Function	calcium ion binding	Interproscan