Gene detail

Detailed information of evm.model.Chr19.113 in Hemicorallium imperiale

Genomic Location: Chr19:2228029...2283358
NR annotation: XP_046864595.1, WD repeat-containing protein 48-like [Xenia sp. Carnegie-2017]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
Q6PFM9	WD repeat-containing protein 48 OS=Danio rerio OX=7955 GN=wdr48 PE=2 SV=2
Q05B17	WD repeat-containing protein 48 OS=Xenopus tropicalis OX=8364 GN=wdr48 PE=2 SV=1
Q5RAW8	WD repeat-containing protein 48 OS=Pongo abelii OX=9601 GN=WDR48 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00400	WD40	WD domain, G-beta repeat	Repeat	Interproscan
PF11816	DUF3337	Domain of unknown function (DUF3337)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001680	Repeat	WD40 repeat	Interproscan
IPR015943	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR036322	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan
IPR051246	Family	WD repeat-containing protein 48	Interproscan
IPR020472	Repeat	G-protein beta WD-40 repeat	Interproscan
IPR021772	Family	WDR48/Bun107	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19862	WD REPEAT-CONTAINING PROTEIN 48	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0000724	Biological Process	double-strand break repair via homologous recombination	Interproscan
GO:0043130	Molecular Function	ubiquitin binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K15361	WDR48, UAF1; WD repeat-containing protein 48	-	DNA repair and recombination proteins	ko03400	deepkoala