Detailed information of evm.model.Chr19.227 in Hemicorallium imperiale

Genomic Location: Chr19:4845932...4857228
NR annotation: XP_028406068.1, nucleoporin-like protein 2 [Dendronephthya gigantea]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q8CIC2Nucleoporin NUP42 OS=Mus musculus OX=10090 GN=Nup42 PE=2 SV=1
O15504Nucleoporin NUP42 OS=Homo sapiens OX=9606 GN=NUP42 PE=1 SV=1
Q5RB98Nucleoporin NUP42 OS=Pongo abelii OX=9601 GN=NUP42 PE=2 SV=1
Gene familySubfamily
Transcription Factors Familyzf-CCCH

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00642zf-CCCHZinc finger C-x8-C-x5-C-x3-H type (and similar)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR051767FamilyNucleoporin NUP42 domain-containing proteinInterproscan
IPR000571DomainZinc finger, CCCH-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46527NUCLEOPORIN-LIKE PROTEIN 2Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0046872Molecular Functionmetal ion bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14321NUPL2, NUP42, CG1; nucleoporin-like protein 2-Messenger RNA biogenesisko03019deepkoala

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