Detailed information of evm.model.Chr19.232 in Hemicorallium imperiale

Genomic Location: Chr19:4940027...4950896
NR annotation: CAB3995613.1, stromal cell-derived factor 2-like [Paramuricea clavata]
Species abbreviation HIMPE · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr19.232 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q99470Stromal cell-derived factor 2 OS=Homo sapiens OX=9606 GN=SDF2 PE=1 SV=2
Q3SZ45Stromal cell-derived factor 2 OS=Bos taurus OX=9913 GN=SDF2 PE=2 SV=1
Q9DCT5Stromal cell-derived factor 2 OS=Mus musculus OX=10090 GN=Sdf2 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007345 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02815
all species →		MIRMIR domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR016093
all species →		DomainMIR motifInterproscan
IPR036300
all species →		Homologous_superfamilyMir domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46809
all species →		STROMAL CELL-DERIVED FACTOR 2-LIKE PROTEINInterproscan

 Gene Ontology
No Gene Ontology signature was detected for evm.model.Chr19.232. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr19.232.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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