Detailed information of evm.model.Chr19.270 in Hemicorallium imperiale

Genomic Location: Chr19:6093666...6103149
NR annotation: XP_010014041.1, PREDICTED: polyubiquitin-B isoform X8 [Nestor notabilis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P84589Ubiquitin (Fragment) OS=Lumbricus terrestris OX=6398 PE=1 SV=2
Q865C5Ubiquitin OS=Camelus dromedarius OX=9838 PE=3 SV=2
P68197Ubiquitin OS=Ceratitis capitata OX=7213 PE=1 SV=1
Gene familySubfamily
Ubiquitin FamilyULD|UBL|NEDD8
Ubiquitin FamilyULD|UFD/UBQ|UBQ_Other

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00240ubiquitinUbiquitin familyDomainInterproscan
PF02037SAPSAP domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036361Homologous_superfamilySAP domain superfamilyInterproscan
IPR000626DomainUbiquitin-like domainInterproscan
IPR003034DomainSAP domainInterproscan
IPR050158FamilyUbiquitin and ubiquitin-likeInterproscan
IPR029071Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10666UBIQUITINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0019941Biological Processmodification-dependent protein catabolic processInterproscan
GO:0031386Molecular Functionprotein tag activityInterproscan
GO:0031625Molecular Functionubiquitin protein ligase bindingInterproscan

TOP