Detailed information of evm.model.Chr19.281 in Hemicorallium imperiale

Genomic Location: Chr19:6290684...6292940
NR annotation: XP_028405931.1, syndecan-1-like [Dendronephthya gigantea]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr19.281 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0009140 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01034
all species →		SyndecanSyndecan domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001050
all species →		FamilySyndecanInterproscan
IPR003585
all species →		DomainNeurexin/syndecan/glycophorin CInterproscan
IPR027789
all species →		DomainSyndecan/Neurexin domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10915
all species →		SYNDECANInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0009986
all species →		Cellular Componentcell surfaceInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0016477
all species →		Biological Processcell migrationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr19.281.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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