Detailed information of evm.model.Chr19.302 in Hemicorallium imperiale

Genomic Location: Chr19:6773452...6813060
NR annotation: CAB3989569.1, tRNA (guanine(10)-N2)-methyltransferase homolog isoform X1 [Paramuricea clavata]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr19.302 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q05B63tRNA (guanine(10)-N(2))-methyltransferase TRMT11 OS=Bos taurus OX=9913 GN=TRMT11 PE=2 SV=1
Q6YJI5tRNA (guanine(10)-N(2))-methyltransferase TRMT11 OS=Gallus gallus OX=9031 GN=TRMT11 PE=2 SV=1
Q5R962tRNA (guanine(10)-N(2))-methyltransferase TRMT11 OS=Pongo abelii OX=9601 GN=TRMT11 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003571 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01170
all species →		UPF0020Putative RNA methylase family UPF0020DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR029063
all species →		Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan
IPR016691
all species →		FamilytRNA guanosine-2'-O-methyltransferase, TRM11Interproscan
IPR000241
all species →		DomainRibosomal RNA large subunit methyltransferase K/L-like, methyltransferase domainInterproscan
IPR002052
all species →		Conserved_siteDNA methylase, N-6 adenine-specific, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13370
all species →		RNA METHYLASE-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0160102
all species →		Molecular FunctiontRNA (guanine(10)-N2)-methyltransferase activityInterproscan
GO:0004809
all species →		Molecular Functionobsolete tRNA (guanine-N2-)-methyltransferase activityInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0008168
all species →		Molecular Functionmethyltransferase activityInterproscan
GO:0003676
all species →		Molecular Functionnucleic acid bindingInterproscan
GO:0032259
all species →		Biological ProcessmethylationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K15430TRM11, TRMT11; tRNA (guanine10-N2)-methyltransferaseEC:2.1.1.214
Transfer RNA biogenesisko03016deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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