Detailed information of evm.model.Chr19.326 in Hemicorallium imperiale

Genomic Location: Chr19:7699885...7703860
NR annotation: CAB3992967.1, ribonuclease ZC3H12C [Paramuricea clavata]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr19.326 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5D1E8Endoribonuclease ZC3H12A OS=Homo sapiens OX=9606 GN=ZC3H12A PE=1 SV=1
A0JPN4Endoribonuclease ZC3H12A OS=Rattus norvegicus OX=10116 GN=Zc3h12a PE=2 SV=1
Q5D1E7Endoribonuclease ZC3H12A OS=Mus musculus OX=10090 GN=Zc3h12a PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001621 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF11977
all species →		RNase_Zc3h12aZc3h12a-like Ribonuclease NYN domainDomainInterproscan
PF18039
all species →		UBA_6UBA-like domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000571
all species →		DomainZinc finger, CCCH-typeInterproscan
IPR021869
all species →		DomainRibonuclease Zc3h12a-like, NYN domainInterproscan
IPR040546
all species →		DomainRege-1, UBA-like domainInterproscan
IPR051101
all species →		FamilyZC3H12/N4BP1 Ribonuclease and RegulatorInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12876
all species →		N4BP1-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0046872
all species →		Molecular Functionmetal ion bindingInterproscan
GO:0003729
all species →		Molecular FunctionmRNA bindingInterproscan
GO:0004521
all species →		Molecular FunctionRNA endonuclease activityInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0036464
all species →		Cellular Componentcytoplasmic ribonucleoprotein granuleInterproscan
GO:0090502
all species →		Biological Processobsolete RNA phosphodiester bond hydrolysis, endonucleolyticInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr19.326.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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