Gene detail

Detailed information of evm.model.Chr20.16 in Hemicorallium imperiale

Genomic Location: Chr20:371766...395628
NR annotation: XP_035694044.1, malignant fibrous histiocytoma-amplified sequence 1 homolog [Branchiostoma floridae]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q54FK7	Ras-related protein RabL OS=Dictyostelium discoideum OX=44689 GN=rabL PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13855	LRR_8	Leucine rich repeat	Repeat	Interproscan
PF00560	LRR_1	Leucine Rich Repeat	Repeat	Interproscan
PF08477	Roc	Ras of Complex, Roc, domain of DAPkinase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR001611	Repeat	Leucine-rich repeat	Interproscan
IPR020859	Domain	Roc domain	Interproscan
IPR050715	Family	Leucine-rich repeat and signaling effector domain-containing protein	Interproscan
IPR032675	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR003591	Repeat	Leucine-rich repeat, typical subtype	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45752	LEUCINE-RICH REPEAT-CONTAINING	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0007165	Biological Process	signal transduction	Interproscan