Detailed information of evm.model.Chr20.17 in Hemicorallium imperiale

Genomic Location: Chr20:523648...526838
NR annotation: XP_048576954.1, malignant fibrous histiocytoma-amplified sequence 1 homolog isoform X3 [Nematostella vectensis]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr20.17 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001343 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08477
all species →		RocRas of Complex, Roc, domain of DAPkinaseDomainInterproscan
PF00560
all species →		LRR_1Leucine Rich RepeatRepeatInterproscan
PF13855
all species →		LRR_8Leucine rich repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR032675
all species →		Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR020859
all species →		DomainRoc domainInterproscan
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR001611
all species →		RepeatLeucine-rich repeatInterproscan
IPR052595
all species →		FamilyLeucine-rich repeat-containing protein 69/Receptor-likeInterproscan
IPR003591
all species →		RepeatLeucine-rich repeat, typical subtypeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48057
all species →		LEUCINE-RICH REPEAT SERINE/THREONINE-PROTEIN KINASE 1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr20.17.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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