Detailed information of evm.model.Chr20.375 in Hemicorallium imperiale

Genomic Location: Chr20:10574392...10590451
NR annotation: CAB4008655.1, Hypothetical predicted protein [Paramuricea clavata]
Species abbreviation HIMPE · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr20.375 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0017754 (this species only)
Transcription factor familyHMG · all TF in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00505
all species →		HMG_boxHMG (high mobility group) boxDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050342
all species →		FamilyHigh Mobility Group Box (HMGB)Interproscan
IPR009071
all species →		DomainHigh mobility group box domainInterproscan
IPR036910
all species →		Homologous_superfamilyHigh mobility group box domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48112
all species →		HIGH MOBILITY GROUP PROTEIN DSP1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0008301
all species →		Molecular FunctionDNA binding, bendingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr20.375.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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