Detailed information of evm.model.Chr20.409 in Hemicorallium imperiale

Genomic Location: Chr20:11504855...11510977
NR annotation: CAB3992930.1, Selenium-binding 1 [Paramuricea clavata]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr20.409 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6DCH7Methanethiol oxidase OS=Xenopus laevis OX=8355 GN=selenbp1-b PE=2 SV=1
Q569D5Methanethiol oxidase OS=Xenopus tropicalis OX=8364 GN=selenbp1 PE=2 SV=1
Q52KZ7Methanethiol oxidase OS=Xenopus laevis OX=8355 GN=selenbp1-a PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001897 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05694
all species →		SBP5656kDa selenium binding protein (SBP56)RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR008826
all species →		FamilySelenium-binding proteinInterproscan
IPR015943
all species →		Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23300
all species →		METHANETHIOL OXIDASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0008430
all species →		Molecular Functionselenium bindingInterproscan
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K17285SELENBP1; methanethiol oxidaseEC:1.8.3.4
Exosomeko04147deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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