Detailed information of evm.model.Chr20.422 in Hemicorallium imperiale

Genomic Location: Chr20:11878946...11891510
NR annotation: CAB3989616.1, tyrosine- phosphatase non-receptor type 13-like isoform X1 [Paramuricea clavata]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr20.422 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q64512Tyrosine-protein phosphatase non-receptor type 13 OS=Mus musculus OX=10090 GN=Ptpn13 PE=1 SV=2
Q12923Tyrosine-protein phosphatase non-receptor type 13 OS=Homo sapiens OX=9606 GN=PTPN13 PE=1 SV=2
Q7KRY7Protein lap4 OS=Drosophila melanogaster OX=7227 GN=scrib PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002205 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00595
all species →		PDZPDZ domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001478
all species →		DomainPDZ domainInterproscan
IPR036034
all species →		Homologous_superfamilyPDZ superfamilyInterproscan
IPR052074
all species →		FamilyNon-receptor Tyrosine-protein PhosphatasesInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46900
all species →		TYROSINE-PROTEIN PHOSPHATASE NON-RECEPTOR TYPE 13Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr20.422.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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