Detailed information of evm.model.Chr20.462 in Hemicorallium imperiale

Genomic Location: Chr20:12911126...12916354
NR annotation: XP_048576954.1, malignant fibrous histiocytoma-amplified sequence 1 homolog isoform X3 [Nematostella vectensis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q58DS5Ras-related protein Rab-13 OS=Bos taurus OX=9913 GN=RAB13 PE=1 SV=1
P51153Ras-related protein Rab-13 OS=Homo sapiens OX=9606 GN=RAB13 PE=1 SV=1
F1PTE3Ras-related protein Rab-13 OS=Canis lupus familiaris OX=9615 GN=RAB13 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00560LRR_1Leucine Rich RepeatRepeatInterproscan
PF12799LRR_4Leucine Rich repeats (2 copies)RepeatInterproscan
PF08477RocRas of Complex, Roc, domain of DAPkinaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001611RepeatLeucine-rich repeatInterproscan
IPR025875RepeatLeucine rich repeat 4Interproscan
IPR003591RepeatLeucine-rich repeat, typical subtypeInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR020859DomainRoc domainInterproscan
IPR050715FamilyLeucine-rich repeat and signaling effector domain-containing proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45752LEUCINE-RICH REPEAT-CONTAININGInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0007165Biological Processsignal transductionInterproscan

TOP