Gene detail

Detailed information of evm.model.Chr20.466 in Hemicorallium imperiale

Genomic Location: Chr20:12973426...13007215
NR annotation: XP_028402376.1, tight junction protein ZO-1-like isoform X1 [Dendronephthya gigantea]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Gene family

Uniprot term	Description
O97758	Tight junction protein 1 OS=Canis lupus familiaris OX=9615 GN=TJP1 PE=1 SV=1
A0A0G2K2P5	Tight junction protein ZO-1 OS=Rattus norvegicus OX=10116 GN=Tjp1 PE=1 SV=1
Q07157	Tight junction protein 1 OS=Homo sapiens OX=9606 GN=TJP1 PE=1 SV=3

Gene family	Subfamily
Ubiquitin Family	UBD\|Other\|SH3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00625	Guanylate_kin	Guanylate kinase	Domain	Interproscan
PF00791	ZU5	ZU5 domain	Family	Interproscan
PF00595	PDZ	PDZ domain	Domain	Interproscan
PF07653	SH3_2	Variant SH3 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001478	Domain	PDZ domain	Interproscan
IPR000906	Domain	ZU5 domain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR008145	Domain	Guanylate kinase/L-type calcium channel beta subunit	Interproscan
IPR036034	Homologous_superfamily	PDZ superfamily	Interproscan
IPR008144	Domain	Guanylate kinase-like domain	Interproscan
IPR001452	Domain	SH3 domain	Interproscan
IPR036028	Homologous_superfamily	SH3-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13865	TIGHT JUNCTION PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0005923	Cellular Component	bicellular tight junction	Interproscan
GO:0045216	Biological Process	cell-cell junction organization	Interproscan
GO:0050839	Molecular Function	cell adhesion molecule binding	Interproscan
GO:0098609	Biological Process	cell-cell adhesion	Interproscan
GO:0150105	Biological Process	protein localization to cell-cell junction	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K05701	TJP1, ZO1; tight junction protein 1	-	Cytoskeleton proteins	ko04812	deepkoala