Detailed information of evm.model.Chr20.477 in Hemicorallium imperiale

Genomic Location: Chr20:13213362...13218197
NR annotation: CAB3993714.1, methionyl-tRNA formyltransferase, mitochondrial-like [Paramuricea clavata]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr20.477 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
B0S140Methionyl-tRNA formyltransferase OS=Finegoldia magna (strain ATCC 29328 / DSM 20472 / WAL 2508) OX=334413 GN=fmt PE=3 SV=1
B8CWS7Methionyl-tRNA formyltransferase OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) OX=373903 GN=fmt PE=3 SV=1
Q98RG4Methionyl-tRNA formyltransferase OS=Mycoplasmopsis pulmonis (strain UAB CTIP) OX=272635 GN=fmt PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003249 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00551
all species →		Formyl_trans_NFormyl transferaseDomainInterproscan
PF02911
all species →		Formyl_trans_CFormyl transferase, C-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036477
all species →		Homologous_superfamilyFormyl transferase, N-terminal domain superfamilyInterproscan
IPR011034
all species →		Homologous_superfamilyFormyl transferase-like, C-terminal domain superfamilyInterproscan
IPR002376
all species →		DomainFormyl transferase, N-terminalInterproscan
IPR005793
all species →		DomainFormyl transferase, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11138
all species →		METHIONYL-TRNA FORMYLTRANSFERASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0009058
all species →		Biological Processbiosynthetic processInterproscan
GO:0003824
all species →		Molecular Functioncatalytic activityInterproscan
GO:0004479
all species →		Molecular Functionmethionyl-tRNA formyltransferase activityInterproscan
GO:0005739
all species →		Cellular ComponentmitochondrionInterproscan
GO:0071951
all species →		Biological Processconversion of methionyl-tRNA to N-formyl-methionyl-tRNAInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr20.477.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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