Genomic Location: Chr20:13750351...13813432
NR annotation: XP_028418642.1, uncharacterized protein LOC114544109 [Dendronephthya gigantea]
Species Hemicorallium imperiale · all data for this species · gene families
evm.model.Chr20.488 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| Q91W50 | Cold shock domain-containing protein E1 OS=Mus musculus OX=10090 GN=Csde1 PE=1 SV=1 |
| P18395 | Cold shock domain-containing protein E1 OS=Rattus norvegicus OX=10116 GN=Csde1 PE=2 SV=1 |
| O75534 | Cold shock domain-containing protein E1 OS=Homo sapiens OX=9606 GN=CSDE1 PE=1 SV=2 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0003220 (this species only) |
| Transcription factor family | CSD · all TF in this species |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00059 all species → | Lectin_C | Lectin C-type domain | Domain | Interproscan |
| PF07679 all species → | I-set | Immunoglobulin I-set domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001304 all species → | Domain | C-type lectin-like | Interproscan |
| IPR012340 all species → | Homologous_superfamily | Nucleic acid-binding, OB-fold | Interproscan |
| IPR007110 all species → | Domain | Immunoglobulin-like domain | Interproscan |
| IPR003961 all species → | Domain | Fibronectin type III | Interproscan |
| IPR016186 all species → | Homologous_superfamily | C-type lectin-like/link domain superfamily | Interproscan |
| IPR051004 all species → | Family | Dendritic cell-specific ICAM-grabbing non-integrin domain-containing protein | Interproscan |
| IPR036116 all species → | Homologous_superfamily | Fibronectin type III superfamily | Interproscan |
| IPR036179 all species → | Homologous_superfamily | Immunoglobulin-like domain superfamily | Interproscan |
| IPR013783 all species → | Homologous_superfamily | Immunoglobulin-like fold | Interproscan |
| IPR013098 all species → | Domain | Immunoglobulin I-set | Interproscan |
| IPR016187 all species → | Homologous_superfamily | C-type lectin fold | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR22802 all species → | C-TYPE LECTIN SUPERFAMILY MEMBER | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005515 all species → | Molecular Function | protein binding | Interproscan |
| GO:0009897 all species → | Cellular Component | external side of plasma membrane | Interproscan |
| GO:0030246 all species → | Molecular Function | carbohydrate binding | Interproscan |
| GO:0044419 all species → | Biological Process | biological process involved in interspecies interaction between organisms | Interproscan |
evm.model.Chr20.488.
