Gene detail

Detailed information of evm.model.Chr20.488 in Hemicorallium imperiale

Genomic Location: Chr20:13750351...13813432
NR annotation: XP_028418642.1, uncharacterized protein LOC114544109 [Dendronephthya gigantea]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
Q91W50	Cold shock domain-containing protein E1 OS=Mus musculus OX=10090 GN=Csde1 PE=1 SV=1
P18395	Cold shock domain-containing protein E1 OS=Rattus norvegicus OX=10116 GN=Csde1 PE=2 SV=1
O75534	Cold shock domain-containing protein E1 OS=Homo sapiens OX=9606 GN=CSDE1 PE=1 SV=2

Gene family	Subfamily
Transcription Factors Family	CSD

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00059	Lectin_C	Lectin C-type domain	Domain	Interproscan
PF07679	I-set	Immunoglobulin I-set domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001304	Domain	C-type lectin-like	Interproscan
IPR012340	Homologous_superfamily	Nucleic acid-binding, OB-fold	Interproscan
IPR007110	Domain	Immunoglobulin-like domain	Interproscan
IPR003961	Domain	Fibronectin type III	Interproscan
IPR016186	Homologous_superfamily	C-type lectin-like/link domain superfamily	Interproscan
IPR051004	Family	Dendritic cell-specific ICAM-grabbing non-integrin domain-containing protein	Interproscan
IPR036116	Homologous_superfamily	Fibronectin type III superfamily	Interproscan
IPR036179	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR013098	Domain	Immunoglobulin I-set	Interproscan
IPR016187	Homologous_superfamily	C-type lectin fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22802	C-TYPE LECTIN SUPERFAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0009897	Cellular Component	external side of plasma membrane	Interproscan
GO:0030246	Molecular Function	carbohydrate binding	Interproscan
GO:0044419	Biological Process	biological process involved in interspecies interaction between organisms	Interproscan