Detailed information of evm.model.Chr20.491 in Hemicorallium imperiale

Genomic Location: Chr20:13859207...13879065
NR annotation: CAB3993385.1, tropomodulin-3-like [Paramuricea clavata]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr20.491 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A0JNC0Tropomodulin-1 OS=Bos taurus OX=9913 GN=TMOD1 PE=2 SV=1
P49813Tropomodulin-1 OS=Mus musculus OX=10090 GN=Tmod1 PE=1 SV=2
P70567Tropomodulin-1 OS=Rattus norvegicus OX=10116 GN=Tmod1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002197 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03250
all species →		TropomodulinTropomodulinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR032675
all species →		Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR004934
all species →		FamilyTropomodulinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10901
all species →		TROPOMODULINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005523
all species →		Molecular Functiontropomyosin bindingInterproscan
GO:0005856
all species →		Cellular ComponentcytoskeletonInterproscan
GO:0007015
all species →		Biological Processactin filament organizationInterproscan
GO:0051694
all species →		Biological Processpointed-end actin filament cappingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K10370TMOD; tropomodulin-Cytoskeleton proteinsko04812deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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