Detailed information of evm.model.Chr20.54 in Hemicorallium imperiale

Genomic Location: Chr20:1640523...1657851
NR annotation: XP_035694044.1, malignant fibrous histiocytoma-amplified sequence 1 homolog [Branchiostoma floridae]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q54FK7Ras-related protein RabL OS=Dictyostelium discoideum OX=44689 GN=rabL PE=3 SV=1
P20340Ras-related protein Rab-6A OS=Homo sapiens OX=9606 GN=RAB6A PE=1 SV=3
P35279Ras-related protein Rab-6A OS=Mus musculus OX=10090 GN=Rab6a PE=1 SV=4

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13855LRR_8Leucine rich repeatRepeatInterproscan
PF00560LRR_1Leucine Rich RepeatRepeatInterproscan
PF08477RocRas of Complex, Roc, domain of DAPkinaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR001611RepeatLeucine-rich repeatInterproscan
IPR050216FamilyLeucine-rich repeat domain-containing proteinInterproscan
IPR003591RepeatLeucine-rich repeat, typical subtypeInterproscan
IPR020859DomainRoc domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48051-Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan

TOP