Gene detail

Detailed information of evm.model.Chr21.112_evm.model.Chr21.113 in Hemicorallium imperiale

Genomic Location: Chr21:2957338...3013259
NR annotation: CAB4005094.1, neurogenic locus notch homolog 1-like [Paramuricea clavata]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
P14780	Matrix metalloproteinase-9 OS=Homo sapiens OX=9606 GN=MMP9 PE=1 SV=3
P11722	Fibronectin OS=Gallus gallus OX=9031 GN=FN1 PE=2 SV=4
Q28377	Fibronectin OS=Equus caballus OX=9796 GN=FN1 PE=2 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00008	EGF	EGF-like domain	Domain	Interproscan
PF00040	fn2	Fibronectin type II domain	Domain	Interproscan
PF00354	Pentaxin	Pentaxin family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000742	Domain	EGF-like domain	Interproscan
IPR000562	Domain	Fibronectin type II domain	Interproscan
IPR001759	Family	Pentraxin-related	Interproscan
IPR036943	Homologous_superfamily	Fibronectin type II domain superfamily	Interproscan
IPR013806	Homologous_superfamily	Kringle-like fold	Interproscan
IPR013320	Homologous_superfamily	Concanavalin A-like lectin/glucanase domain superfamily	Interproscan
IPR051360	Family	Neuronal Pentraxin and Related	Interproscan
IPR001881	Domain	EGF-like calcium-binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19277	PENTRAXIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005509	Molecular Function	calcium ion binding	Interproscan