Detailed information of evm.model.Chr21.204 in Hemicorallium imperiale

Genomic Location: Chr21:4499270...4504328
NR annotation: XP_046860580.1, proliferating cell nuclear antigen-like [Xenia sp. Carnegie-2017]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Chr21.204 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P12004Proliferating cell nuclear antigen OS=Homo sapiens OX=9606 GN=PCNA PE=1 SV=1
P61258Proliferating cell nuclear antigen OS=Macaca fascicularis OX=9541 GN=PCNA PE=2 SV=1
P04961Proliferating cell nuclear antigen OS=Rattus norvegicus OX=10116 GN=Pcna PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008115 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00411
all species →
Ribosomal_S11Ribosomal protein S11FamilyInterproscan
PF02747
all species →
PCNA_CProliferating cell nuclear antigen, C-terminal domainDomainInterproscan
PF00705
all species →
PCNA_NProliferating cell nuclear antigen, N-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR018102
all species →
Conserved_siteSmall ribosomal subunit protein uS11, conserved siteInterproscan
IPR046938
all species →
Homologous_superfamilyDNA clamp superfamilyInterproscan
IPR001971
all species →
FamilySmall ribosomal subunit protein uS11Interproscan
IPR022659
all species →
Conserved_siteProliferating cell nuclear antigen, PCNA, conserved siteInterproscan
IPR036967
all species →
Homologous_superfamilySmall ribosomal subunit protein uS11 superfamilyInterproscan
IPR000730
all species →
FamilyProliferating cell nuclear antigen, PCNAInterproscan
IPR022649
all species →
DomainProliferating cell nuclear antigen, PCNA, C-terminalInterproscan
IPR022648
all species →
DomainProliferating cell nuclear antigen, PCNA, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11352
all species →
PROLIFERATING CELL NUCLEAR ANTIGENInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003735
all species →
Molecular Functionstructural constituent of ribosomeInterproscan
GO:0005840
all species →
Cellular ComponentribosomeInterproscan
GO:0006412
all species →
Biological ProcesstranslationInterproscan
GO:0003677
all species →
Molecular FunctionDNA bindingInterproscan
GO:0006272
all species →
Biological Processleading strand elongationInterproscan
GO:0006275
all species →
Biological Processregulation of DNA replicationInterproscan
GO:0006298
all species →
Biological Processmismatch repairInterproscan
GO:0019985
all species →
Biological Processtranslesion synthesisInterproscan
GO:0030337
all species →
Molecular FunctionDNA polymerase processivity factor activityInterproscan
GO:0043626
all species →
Cellular ComponentPCNA complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Chr21.204.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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