Detailed information of evm.model.Chr21.294 in Hemicorallium imperiale

Genomic Location: Chr21:5685677...5689360
NR annotation: CAB4004824.1, sine oculis [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P53147Homeobox protein TOS8 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TOS8 PE=3 SV=1
P41817Homeobox protein CUP9 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=CUP9 PE=1 SV=1
Q19503Homeobox protein ceh-40 OS=Caenorhabditis elegans OX=6239 GN=ceh-40 PE=1 SV=1
Gene familySubfamily
Transcription Factors FamilyHomeobox

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16878SIX1_SDTranscriptional regulator, SIX1, N-terminal SD domainDomainInterproscan
PF05920Homeobox_KNHomeobox KN domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR031701DomainHomeobox protein SIX1, N-terminal SD domainInterproscan
IPR008422DomainHomeobox KN domainInterproscan
IPR001356DomainHomeobox domainInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10390HOMEOBOX PROTEIN SIXInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005667Cellular Componenttranscription regulator complexInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan

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