Gene detail

Detailed information of evm.model.Chr21.332 in Hemicorallium imperiale

Genomic Location: Chr21:6418833...6443869
NR annotation: XP_035660261.1, LOW QUALITY PROTEIN: interferon-induced GTP-binding protein Mx3-like [Branchiostoma floridae]
Species Hemicorallium imperiale · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

No sequence record for evm.model.Chr21.332 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q91196	Interferon-induced GTP-binding protein Mx2 OS=Oncorhynchus mykiss OX=8022 GN=mx2 PE=2 SV=1
Q7T2P0	Interferon-induced GTP-binding protein Mx1 OS=Ictalurus punctatus OX=7998 GN=mx1 PE=2 SV=1
Q91197	Interferon-induced GTP-binding protein Mx3 OS=Oncorhynchus mykiss OX=8022 GN=mx3 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0015931 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01031 all species →	Dynamin_M	Dynamin central region	Family	Interproscan
PF02212 all species →	GED	Dynamin GTPase effector domain	Family	Interproscan
PF00350 all species →	Dynamin_N	Dynamin family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR022812 all species →	Family	Dynamin	Interproscan
IPR000375 all species →	Domain	Dynamin stalk domain	Interproscan
IPR003130 all species →	Domain	Dynamin GTPase effector	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR001401 all species →	Domain	Dynamin, GTPase domain	Interproscan
IPR019762 all species →	Conserved_site	Dynamin, GTPase region, conserved site	Interproscan
IPR020850 all species →	Domain	GTPase effector domain	Interproscan
IPR030381 all species →	Domain	Dynamin-type guanine nucleotide-binding (G) domain	Interproscan
IPR045063 all species →	Domain	Dynamin, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11566 all species →	DYNAMIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003924 all species →	Molecular Function	GTPase activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0005874 all species →	Cellular Component	microtubule	Interproscan
GO:0008017 all species →	Molecular Function	microtubule binding	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0005525 all species →	Molecular Function	GTP binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K14754	MX; interferon-induced GTP-binding protein Mx	-	Human papillomavirus infection	ko05165	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.