Detailed information of evm.model.Chr21.528 in Hemicorallium imperiale

Genomic Location: Chr21:14725262...14736284
NR annotation: XP_028393552.1, transforming growth factor-beta receptor-associated protein 1 homolog [Dendronephthya gigantea]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A4IG72Transforming growth factor-beta receptor-associated protein 1 homolog OS=Danio rerio OX=7955 GN=tgfbrap1 PE=2 SV=1
Q8WUH2Transforming growth factor-beta receptor-associated protein 1 OS=Homo sapiens OX=9606 GN=TGFBRAP1 PE=1 SV=1
A7MB11Transforming growth factor-beta receptor-associated protein 1 OS=Bos taurus OX=9913 GN=TGFBRAP1 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10367Vps39_2Vacuolar sorting protein 39 domain 2DomainInterproscan
PF10366Vps39_1Vacuolar sorting protein 39 domain 1RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001180DomainCitron homology (CNH) domainInterproscan
IPR032914FamilyVam6/VPS39/TRAP1 familyInterproscan
IPR019453DomainVacuolar sorting protein 39/Transforming growth factor beta receptor-associated domain 2Interproscan
IPR019452DomainVacuolar sorting protein 39/Transforming growth factor beta receptor-associated domain 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12894CNH DOMAIN CONTAININGInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006914Biological ProcessautophagyInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0016192Biological Processvesicle-mediated transportInterproscan
GO:0034058Biological Processendosomal vesicle fusionInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K20177VPS3, TGFBRAP1; vacuolar protein sorting-associated protein 3-Membrane traffickingko04131deepkoala

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