Detailed information of evm.model.Contig110.12 in Hemicorallium imperiale

Genomic Location: Contig110:25948...27972
NR annotation: CAA0100443.1, Methionine--tRNA ligase [BD1-7 clade bacterium]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Contig110.12 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A1TZ66Methionine--tRNA ligase OS=Marinobacter nauticus (strain ATCC 700491 / DSM 11845 / VT8) OX=351348 GN=metG PE=3 SV=1
Q2SKU2Methionine--tRNA ligase OS=Hahella chejuensis (strain KCTC 2396) OX=349521 GN=metG PE=3 SV=1
Q21I21Methionine--tRNA ligase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) OX=203122 GN=metG PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002161 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01588
all species →		tRNA_bindPutative tRNA binding domainDomainInterproscan
PF09334
all species →		tRNA-synt_1gtRNA synthetases class I (M)FamilyInterproscan
PF19303
all species →		Anticodon_3Anticodon binding domain of methionyl tRNA ligaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR029038
all species →		Homologous_superfamilyMethionyl-tRNA synthetase, Zn-domainInterproscan
IPR001412
all species →		Conserved_siteAminoacyl-tRNA synthetase, class I, conserved siteInterproscan
IPR012340
all species →		Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR033911
all species →		DomainMethioninyl-tRNA synthetase core domainInterproscan
IPR023458
all species →		FamilyMethionine-tRNA ligase, type 1Interproscan
IPR009080
all species →		Homologous_superfamilyAminoacyl-tRNA synthetase, class Ia, anticodon-bindingInterproscan
IPR041872
all species →		DomainMethionyl-tRNA synthetase, anticodon-binding domainInterproscan
IPR002547
all species →		DomaintRNA-binding domainInterproscan
IPR015413
all species →		DomainMethionyl/Leucyl tRNA synthetaseInterproscan
IPR014729
all species →		Homologous_superfamilyRossmann-like alpha/beta/alpha sandwich foldInterproscan
IPR004495
all species →		DomainMethionyl-tRNA synthetase, beta subunit, C-terminalInterproscan
IPR014758
all species →		FamilyMethionyl-tRNA synthetaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45765
all species →		METHIONINE--TRNA LIGASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000166
all species →		Molecular Functionnucleotide bindingInterproscan
GO:0004812
all species →		Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0005524
all species →		Molecular FunctionATP bindingInterproscan
GO:0006418
all species →		Biological ProcesstRNA aminoacylation for protein translationInterproscan
GO:0004825
all species →		Molecular Functionmethionine-tRNA ligase activityInterproscan
GO:0006431
all species →		Biological Processmethionyl-tRNA aminoacylationInterproscan
GO:0000049
all species →		Molecular FunctiontRNA bindingInterproscan
GO:0005829
all species →		Cellular ComponentcytosolInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K01874MARS, metG; methionyl-tRNA synthetaseEC:6.1.1.10
Transfer RNA biogenesisko03016deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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