Detailed information of evm.model.Contig123.103 in Hemicorallium imperiale

Genomic Location: Contig123:414977...416584
NR annotation: MCK5806819.1, valine--tRNA ligase [Mycoplasmataceae bacterium]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Contig123.103 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5ZZL4Valine--tRNA ligase OS=Mesomycoplasma hyopneumoniae (strain 232) OX=295358 GN=valS PE=3 SV=1
Q4A755Valine--tRNA ligase OS=Mesomycoplasma hyopneumoniae (strain 7448) OX=262722 GN=valS PE=3 SV=1
Q4A917Valine--tRNA ligase OS=Mesomycoplasma hyopneumoniae (strain J / ATCC 25934 / NCTC 10110) OX=262719 GN=valS PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0029920 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13603
all species →		tRNA-synt_1_2Leucyl-tRNA synthetase, editing domainDomainInterproscan
PF00133
all species →		tRNA-synt_1tRNA synthetases class I (I, L, M and V)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR025709
all species →		DomainLeucyl-tRNA synthetase, editing domainInterproscan
IPR009008
all species →		Homologous_superfamilyValyl/Leucyl/Isoleucyl-tRNA synthetase, editing domainInterproscan
IPR002303
all species →		FamilyValine-tRNA ligaseInterproscan
IPR002300
all species →		DomainAminoacyl-tRNA synthetase, class IaInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11946
all species →		VALYL-TRNA SYNTHETASESInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0002161
all species →		Molecular Functionaminoacyl-tRNA editing activityInterproscan
GO:0006418
all species →		Biological ProcesstRNA aminoacylation for protein translationInterproscan
GO:0000166
all species →		Molecular Functionnucleotide bindingInterproscan
GO:0004832
all species →		Molecular Functionvaline-tRNA ligase activityInterproscan
GO:0005524
all species →		Molecular FunctionATP bindingInterproscan
GO:0005829
all species →		Cellular ComponentcytosolInterproscan
GO:0006438
all species →		Biological Processvalyl-tRNA aminoacylationInterproscan
GO:0004812
all species →		Molecular Functionaminoacyl-tRNA ligase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Contig123.103.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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