Detailed information of evm.model.Contig123.11 in Hemicorallium imperiale

Genomic Location: Contig123:42877...43603
NR annotation: MCK5807002.1, tRNA (guanosine(37)-N1)-methyltransferase TrmD [Mycoplasmataceae bacterium]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Contig123.11 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6KHL5tRNA (guanine-N(1)-)-methyltransferase OS=Mycoplasma mobile (strain ATCC 43663 / 163K / NCTC 11711) OX=267748 GN=trmD PE=3 SV=1
A5IZ67tRNA (guanine-N(1)-)-methyltransferase OS=Mycoplasmopsis agalactiae (strain NCTC 10123 / CIP 59.7 / PG2) OX=347257 GN=trmD PE=3 SV=1
Q98Q98tRNA (guanine-N(1)-)-methyltransferase OS=Mycoplasmopsis pulmonis (strain UAB CTIP) OX=272635 GN=trmD PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0013301 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01746
all species →		tRNA_m1G_MTtRNA (Guanine-1)-methyltransferaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002649
all species →		FamilytRNA (guanine-N1-)-methyltransferase TrmDInterproscan
IPR029028
all species →		Homologous_superfamilyAlpha/beta knot methyltransferasesInterproscan
IPR023148
all species →		Homologous_superfamilytRNA (guanine-N(1)-)-methyltransferase, C-terminal domain superfamilyInterproscan
IPR016009
all species →		DomaintRNA methyltransferase TRMD/TRM10-type domainInterproscan
IPR029026
all species →		Homologous_superfamilytRNA (guanine-N1-)-methyltransferase, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46417
all species →		TRNA (GUANINE-N(1)-)-METHYLTRANSFERASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0008033
all species →		Biological ProcesstRNA processingInterproscan
GO:0052906
all species →		Molecular FunctiontRNA (guanine(37)-N1)-methyltransferase activityInterproscan
GO:0002939
all species →		Biological ProcesstRNA N1-guanine methylationInterproscan
GO:0005829
all species →		Cellular ComponentcytosolInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Contig123.11.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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