Gene detail

Detailed information of evm.model.Contig123.135 in Hemicorallium imperiale

Genomic Location: Contig123:566285...571935
NR annotation: NQZ65762.1, DnaJ domain-containing protein [Mycoplasmatales bacterium]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q98PI9	Chaperone protein DnaJ OS=Mycoplasmopsis pulmonis (strain UAB CTIP) OX=272635 GN=dnaJ PE=3 SV=2
Q98Q19	tRNA pseudouridine synthase B OS=Mycoplasmopsis pulmonis (strain UAB CTIP) OX=272635 GN=truB PE=3 SV=1
Q6KHH8	tRNA pseudouridine synthase B OS=Mycoplasma mobile (strain ATCC 43663 / 163K / NCTC 11711) OX=267748 GN=truB PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01509	TruB_N	TruB family pseudouridylate synthase (N terminal domain)	Family	Interproscan
PF00226	DnaJ	DnaJ domain	Domain	Interproscan
PF16198	TruB_C_2	tRNA pseudouridylate synthase B C-terminal domain	Family	Interproscan
PF01556	DnaJ_C	DnaJ C terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001623	Domain	DnaJ domain	Interproscan
IPR008971	Homologous_superfamily	HSP40/DnaJ peptide-binding	Interproscan
IPR014780	Family	tRNA pseudouridine synthase II, TruB	Interproscan
IPR002501	Domain	Pseudouridine synthase II, N-terminal	Interproscan
IPR018253	Conserved_site	DnaJ domain, conserved site	Interproscan
IPR032819	Domain	tRNA pseudouridylate synthase B, C-terminal	Interproscan
IPR002939	Domain	Chaperone DnaJ, C-terminal	Interproscan
IPR036869	Homologous_superfamily	Chaperone J-domain superfamily	Interproscan
IPR020103	Homologous_superfamily	Pseudouridine synthase, catalytic domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13767	TRNA-PSEUDOURIDINE SYNTHASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0006457	Biological Process	protein folding	Interproscan
GO:0051082	Molecular Function	unfolded protein binding	Interproscan
GO:0001522	Biological Process	pseudouridine synthesis	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0009451	Biological Process	RNA modification	Interproscan
GO:0009982	Molecular Function	pseudouridine synthase activity	Interproscan
GO:0006396	Biological Process	RNA processing	Interproscan
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0006400	Biological Process	tRNA modification	Interproscan
GO:1990481	Biological Process	mRNA pseudouridine synthesis	Interproscan