Genomic Location: Contig123:618530...619218
NR annotation: MCR8613109.1, 50S ribosomal protein L7/L12 [Mycoplasma sp.]
Species Hemicorallium imperiale · all data for this species · gene families
evm.model.Contig123.151 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.| UniProt accession | Description |
|---|---|
| Q6KHB0 | Large ribosomal subunit protein bL12 OS=Mycoplasma mobile (strain ATCC 43663 / 163K / NCTC 11711) OX=267748 GN=rplL PE=3 SV=1 |
| Q4A7A8 | Large ribosomal subunit protein bL12 OS=Mesomycoplasma hyopneumoniae (strain 7448) OX=262722 GN=rplL PE=3 SV=1 |
| Q5ZZS0 | Large ribosomal subunit protein bL12 OS=Mesomycoplasma hyopneumoniae (strain 232) OX=295358 GN=rplL PE=3 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0007010 (this species only) |
| Transcription factor family | CSD · all TF in this species |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00313 all species → | CSD | 'Cold-shock' DNA-binding domain | Domain | Interproscan |
| PF16320 all species → | Ribosomal_L12_N | Ribosomal protein L7/L12 dimerisation domain | Domain | Interproscan |
| PF00542 all species → | Ribosomal_L12 | Ribosomal protein L7/L12 C-terminal domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR011129 all species → | Domain | Cold shock domain | Interproscan |
| IPR000206 all species → | Family | Large ribosomal subunit protein bL12 | Interproscan |
| IPR012340 all species → | Homologous_superfamily | Nucleic acid-binding, OB-fold | Interproscan |
| IPR002059 all species → | Domain | Cold-shock protein, DNA-binding | Interproscan |
| IPR014719 all species → | Homologous_superfamily | Ribosomal protein bL12, C-terminal/adaptor protein ClpS-like | Interproscan |
| IPR019844 all species → | Domain | Cold-shock (CSD) domain | Interproscan |
| IPR008932 all species → | Domain | Large ribosomal subunit protein bL12, oligomerization | Interproscan |
| IPR050181 all species → | Family | Cold shock domain-containing protein | Interproscan |
| IPR013823 all species → | Domain | Large ribosomal subunit protein bL12, C-terminal | Interproscan |
| IPR036235 all species → | Homologous_superfamily | Large ribosomal subunit protein bL12, oligomerization domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11544 all species → | COLD SHOCK DOMAIN CONTAINING PROTEINS | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0003676 all species → | Molecular Function | nucleic acid binding | Interproscan |
| GO:0003735 all species → | Molecular Function | structural constituent of ribosome | Interproscan |
| GO:0005840 all species → | Cellular Component | ribosome | Interproscan |
| GO:0006412 all species → | Biological Process | translation | Interproscan |
evm.model.Contig123.151.
