Gene detail

Detailed information of evm.model.Contig123.151 in Hemicorallium imperiale

Genomic Location: Contig123:618530...619218
NR annotation: MCR8613109.1, 50S ribosomal protein L7/L12 [Mycoplasma sp.]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
Q6KHB0	Large ribosomal subunit protein bL12 OS=Mycoplasma mobile (strain ATCC 43663 / 163K / NCTC 11711) OX=267748 GN=rplL PE=3 SV=1
Q4A7A8	Large ribosomal subunit protein bL12 OS=Mesomycoplasma hyopneumoniae (strain 7448) OX=262722 GN=rplL PE=3 SV=1
Q5ZZS0	Large ribosomal subunit protein bL12 OS=Mesomycoplasma hyopneumoniae (strain 232) OX=295358 GN=rplL PE=3 SV=1

Gene family	Subfamily
Transcription Factors Family	CSD

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00313	CSD	'Cold-shock' DNA-binding domain	Domain	Interproscan
PF16320	Ribosomal_L12_N	Ribosomal protein L7/L12 dimerisation domain	Domain	Interproscan
PF00542	Ribosomal_L12	Ribosomal protein L7/L12 C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011129	Domain	Cold shock domain	Interproscan
IPR000206	Family	Large ribosomal subunit protein bL12	Interproscan
IPR012340	Homologous_superfamily	Nucleic acid-binding, OB-fold	Interproscan
IPR002059	Domain	Cold-shock protein, DNA-binding	Interproscan
IPR014719	Homologous_superfamily	Ribosomal protein bL12, C-terminal/adaptor protein ClpS-like	Interproscan
IPR019844	Domain	Cold-shock (CSD) domain	Interproscan
IPR008932	Domain	Large ribosomal subunit protein bL12, oligomerization	Interproscan
IPR050181	Family	Cold shock domain-containing protein	Interproscan
IPR013823	Domain	Large ribosomal subunit protein bL12, C-terminal	Interproscan
IPR036235	Homologous_superfamily	Large ribosomal subunit protein bL12, oligomerization domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11544	COLD SHOCK DOMAIN CONTAINING PROTEINS	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0003735	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005840	Cellular Component	ribosome	Interproscan
GO:0006412	Biological Process	translation	Interproscan