Detailed information of evm.model.Contig123.202 in Hemicorallium imperiale

Genomic Location: Contig123:758218...758529
NR annotation: RTZ69223.1, MAG: hypothetical protein DSZ21_00275 [Mycoplasmatota bacterium]
Species Hemicorallium imperiale · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
No sequence record for evm.model.Contig123.202 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q98RJ3Ribosomal RNA small subunit methyltransferase A OS=Mycoplasmopsis pulmonis (strain UAB CTIP) OX=272635 GN=rsmA PE=3 SV=1
B1ID54Ribosomal RNA small subunit methyltransferase A OS=Clostridium botulinum (strain Okra / Type B1) OX=498213 GN=rsmA PE=3 SV=1
B1KRY8Ribosomal RNA small subunit methyltransferase A OS=Clostridium botulinum (strain Loch Maree / Type A3) OX=498214 GN=rsmA PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004425 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00398
all species →		RrnaADRibosomal RNA adenine dimethylaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR020596
all species →		Conserved_siteRibosomal RNA adenine methylase transferase, conserved siteInterproscan
IPR001737
all species →		FamilyRibosomal RNA adenine methyltransferase KsgA/ErmInterproscan
IPR029063
all species →		Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11727
all species →		DIMETHYLADENOSINE TRANSFERASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000154
all species →		Biological ProcessrRNA modificationInterproscan
GO:0000179
all species →		Molecular FunctionrRNA (adenine-N6,N6-)-dimethyltransferase activityInterproscan
GO:0005829
all species →		Cellular ComponentcytosolInterproscan
GO:0031167
all species →		Biological ProcessrRNA methylationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Contig123.202.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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