Gene detail

Detailed information of evm.model.Contig123.216 in Hemicorallium imperiale

Genomic Location: Contig123:829006...831991
NR annotation: MCK5867206.1, F0F1 ATP synthase subunit beta [Mycoplasmataceae bacterium]
Species Hemicorallium imperiale · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

No sequence record for evm.model.Contig123.216 in HIMPE (the gene ID may belong to a different isoform naming scheme). Try the gene search.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q2ST34	ATP synthase subunit beta OS=Mycoplasma capricolum subsp. capricolum (strain California kid / ATCC 27343 / NCTC 10154) OX=340047 GN=atpD PE=3 SV=1
Q6MS94	ATP synthase subunit beta OS=Mycoplasma mycoides subsp. mycoides SC (strain CCUG 32753 / NCTC 10114 / PG1) OX=272632 GN=atpD PE=3 SV=1
Q38WK5	ATP synthase subunit beta OS=Latilactobacillus sakei subsp. sakei (strain 23K) OX=314315 GN=atpD PE=3 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003927 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00006 all species →	ATP-synt_ab	ATP synthase alpha/beta family, nucleotide-binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR024034 all species →	Homologous_superfamily	ATPase, F1/V1 complex, beta/alpha subunit, C-terminal	Interproscan
IPR003593 all species →	Domain	AAA+ ATPase domain	Interproscan
IPR000194 all species →	Domain	ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR036121 all species →	Homologous_superfamily	ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily	Interproscan
IPR050053 all species →	Family	ATPase alpha/beta chains	Interproscan
IPR005722 all species →	Family	ATP synthase, F1 complex, beta subunit	Interproscan
IPR020003 all species →	Active_site	ATPase, alpha/beta subunit, nucleotide-binding domain, active site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15184 all species →	ATP SYNTHASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016887 all species →	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0046034 all species →	Biological Process	ATP metabolic process	Interproscan
GO:1902600 all species →	Biological Process	proton transmembrane transport	Interproscan
GO:0045261 all species →	Cellular Component	proton-transporting ATP synthase complex, catalytic core F(1)	Interproscan
GO:0046933 all species →	Molecular Function	proton-transporting ATP synthase activity, rotational mechanism	Interproscan
GO:0015986 all species →	Biological Process	proton motive force-driven ATP synthesis	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02112	ATPF1B, atpD; F-type H+/Na+-transporting ATPase subunit beta	EC:7.1.2.2 EC:7.2.2.1	Photosynthesis proteins	ko00194	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.